pCRM CE8036
| CRM: |
| CE8036 |
|---|
| Overlaps: |
| eve stripe 1 |
|---|
| Reference: |
| Sackerson, 1999 |
|---|
| Berman 2002 ID: |
| |
|---|
| Crm Activity: |
| positive |
|---|
| 5' Primer: |
| |
|---|
| 3' Primer: |
| |
|---|
|
| D.mel fasta: |
| dmel unflanked |
|---|
| pCRM region: |
| genomic region |
|---|
| Chrom arm: |
| 2R |
|---|
| pCRM start: |
| 5,046,567 |
|---|
| pCRM end: |
| 5,047,354 |
|---|
| pCRM len: |
| 788 |
|---|
|
| D.pse region homologous: |
| 1 |
|---|
| D.pse fasta: |
| dpse unflanked |
|---|
| dpse arm: |
| 3,213,009 |
|---|
| dpse start: |
| 129,559 |
|---|
| dpse end: |
| 128,726 |
|---|
| dpse len: |
| 834 |
|---|
|
| Flanked D.mel fasta: |
| dmel flanked |
|---|
| Flanked D.pse fasta: |
| dpse flanked |
|---|
| LAGAN alignment (readable): |
| alignment |
|---|
| LAGAN alignment (mfa): |
| alignment |
|---|
|
| D.mel binding site xml: |
| xml |
|---|
|
| overall site conservation z-score: |
| 5.4 |
|---|
|
| Percent identity: |
| 73.6% |
|---|
|
| D.mel sites: |
| 9 |
|---|
| D.pse sites: |
| 11 |
|---|
| Aligned sites: |
| 7 |
|---|
| Aligned + preserved sites: |
| 9 |
|---|
|
| D.mel site dens: |
| 11.4 |
|---|
| D.pse site dens: |
| 13.2 |
|---|
| Aligned site dens: |
| 8.9 |
|---|
| Aligned + preserved site dens: |
| 11.4 |
|---|
|
| pCRM position relative to 5' gene: |
| downstream |
|---|
| pCRM position 5' gene relative: |
| 6,844 |
|---|
| 5' gene CG: |
| CG2328 |
|---|
| 5' gene: |
| eve |
|---|
| 5' gene insitu: |
| eve insitu |
|---|
| 5' gene flybase: |
| eve flybase |
|---|
| 5' gene start: |
| 5,039,723 |
|---|
| 5' gene end: |
| 5,041,412 |
|---|
| 5' gene txl start: |
| 5,040,047 |
|---|
|
| pCRM position 3' gene relative: |
| upstream |
|---|
| pCRM position relative to 3' gene: |
| -2,439 |
|---|
| 3' gene CG: |
| CG2331 |
|---|
| 3' gene: |
| TER94 |
|---|
| 3' gene insitu: |
| TER94 insitu |
|---|
| 3' gene flybase: |
| TER94 flybase |
|---|
| 3' gene start: |
| 5,049,793 |
|---|
| 3' gene end: |
| 5,054,196 |
|---|
| 3' gene txl start: |
| 5,049,919 |
|---|
