pCRM PCE7007

CRM:		PCE7007
Overlaps:		hairy stripes 1,5
Reference:		Pankratz, 1990
Berman 2002 ID:
Crm Activity:		+
5' Primer:
3' Primer:

D.mel fasta:		dmel unflanked
pCRM region:		genomic region
Chrom arm:		3L
pCRM start:		8,629,180
pCRM end:		8,629,966
pCRM len:		787

D.pse region homologous:		1
D.pse fasta:		dpse unflanked
dpse arm:		Dpse_3212377_1_52744
dpse start:		26,928
dpse end:		27,650
dpse len:		723

Flanked D.mel fasta:		dmel flanked
Flanked D.pse fasta:		dpse flanked
LAGAN alignment (readable):		alignment
LAGAN alignment (mfa):		alignment

D.mel binding site xml:		xml

overall site conservation z-score:		7.7

Percent identity:		55.8%

D.mel sites:		16
D.pse sites:		15
Aligned sites:		9
Aligned + preserved sites:		13

D.mel site dens:		20.3
D.pse site dens:		20.7
Aligned site dens:		11.4
Aligned + preserved site dens:		16.5

pCRM position relative to 5' gene:		downstream
pCRM position 5' gene relative:		20,947
5' gene CG:		CG6486
5' gene:		CG6486
5' gene insitu:		CG6486 insitu
5' gene flybase:		CG6486 flybase
5' gene start:		8,608,233
5' gene end:		8,609,426
5' gene txl start:		8,608,256

pCRM position 3' gene relative:		upstream
pCRM position relative to 3' gene:		-4,702
3' gene CG:		CG6494
3' gene:		h
3' gene insitu:		h insitu
3' gene flybase:		h flybase
3' gene start:		8,634,668
3' gene end:		8,637,949
3' gene txl start:		8,634,959