pCRM PCE8464
| CRM: |
| PCE8464 |
|---|
| Overlaps: |
| 0 |
|---|
| Reference: |
| 0 |
|---|
|
| D.mel fasta: |
| dmel unflanked |
|---|
| pCRM region: |
| genomic region |
|---|
| Chrom arm: |
| 3L.3 |
|---|
| pCRM start: |
| 17,314,105 |
|---|
| pCRM end: |
| 17,314,815 |
|---|
| pCRM len: |
| 711 |
|---|
|
| D.pse fasta: |
| dpse unflanked |
|---|
| dpse arm: |
| 3,212,355 |
|---|
| dpse start: |
| 441,742 |
|---|
| dpse end: |
| 442,574 |
|---|
| dpse len: |
| 833 |
|---|
|
| Flanked D.mel fasta: |
| dmel flanked |
|---|
| Flanked D.pse fasta: |
| dpse flanked |
|---|
| LAGAN alignment (readable): |
| alignment |
|---|
| LAGAN alignment (mfa): |
| alignment |
|---|
|
| D.mel binding site xml: |
| xml |
|---|
|
| overall site conservation z-score: |
| 4.2 |
|---|
|
| percent iden: |
| 72.2% |
|---|
|
| D.mel sites: |
| 10 |
|---|
| D.pse sites: |
| 9 |
|---|
| Aligned sites: |
| 6 |
|---|
| Aligned + preserved sites: |
| 6 |
|---|
|
| D.mel site dens: |
| 14.1 |
|---|
| D.pse site dens: |
| 10.8 |
|---|
| Aligned site dens: |
| 8.4 |
|---|
| Aligned + preserved site dens: |
| 8.4 |
|---|
|
| pCRM position relative to 5' gene: |
| downstream |
|---|
| pCRM position 5' gene relative: |
| +5577 |
|---|
| 5' gene CG: |
| CG7659 |
|---|
| 5' gene: |
| tap |
|---|
| 5' Gap/pair-rule annotation: |
| BDGP |
|---|
| 5' gene insitu: |
| tap insitu |
|---|
| 5' gene flybase: |
| tap flybase |
|---|
| 5' gene start: |
| 17,308,528 |
|---|
| 5' gene end: |
| 17,310,700 |
|---|
| 5' gene txl start: |
| 17,308,671 |
|---|
|
| pCRM position 3' gene relative: |
| +13577 |
|---|
| pCRM position relative to 3' gene: |
| downstream |
|---|
| 3' gene CG: |
| CG6445 |
|---|
| 3' gene: |
| Cad74A |
|---|
| 3' Gap/pair-rule annotation: |
| BDGP |
|---|
| 3' gene insitu: |
| Cad74A insitu |
|---|
| 3' gene flybase: |
| Cad74A flybase |
|---|
| 3' gene start: |
| 17,328,392 |
|---|
| 3' gene end: |
| 17,316,629 |
|---|
| 3' gene txl start: |
| 17,327,315 |
|---|
|
| Additional Gap/pair-rule gene within 20kb: |
| |
|---|
| Gap/pair-rule annotation: |
| |
|---|
| pCRM relative position: |
| |
|---|
