List of files:

Figure6_motifCounts.txt:  Lists the number of motifs present in the 
promoters of genes shown in Figure 6 - Note that the motif counts are only listed if 
the P value for each motif in the relevant cluster is less than 0.00022

Figure6_motifPvals.txt:  Shows the P values for each motif and gene shown 
in Figure 6, based on the hypergeometric distribution 

PAPER_0.06genelist_motifCounts.txt:  Shows the number of each of 43 
different motifs present in the promoters of genes assigned to all 91 centroids
based on a membership cutoff of 0.06 - Note that the motif counts are only listed if
the P value for each motif in the relevant cluster is less than 0.00022

PAPER_0.06genelist_motifPvals.txt:  Shows the P values for each of the 43 
motifs present in the promoters of genes assigned to the 91 centroids with 
a membership cutoff of 0.06

PAPER_0.08genelist_motifCounts.txt:  Shows the number of motifs present in
the promoters of genes assigned to all 91 centroids based on a membership
cutoff of 0.08 - Note that the motif counts are only listed if
the P value for each motif in the relevant cluster is less than 0.00022

Yeaststress_k91_0.06cutoff_geneclusters.txt:  Shows the gene expression data for the 
genes assigned to each of the 91 centroids based on a membership cutoff of 0.06

Yeaststress_k91_0.08cutoff_geneclusters.txt:  Shows the gene expression data for the
genes assigned to each of the 91 centroids based on a membership cutoff of 0.08

** October 23, 2002:  corrected a minor problem with the motif counts 
files - for 6 of 45 motifs the counts were only scored from one strand of 
the promoter.  The data for these motifs (including ABF1, GAL4, HAP1, 
LEU3, MATALPHA and RLM1) have been corrected, although they do not 
affect any of the results discussed in the paper.